Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4RFT2_PETMAIPT/TIG domain-containing protein. (760 aa)    
Predicted Functional Partners:
S4RGF8_PETMA
Uncharacterized protein.
 
     0.916
S4R4B6_PETMA
Proteasome activator subunit 3.
    
   0.755
S4RG11_PETMA
Phosphatidylinositol transfer protein, beta.
      
 0.655
S4RFD1_PETMA
N-ethylmaleimide-sensitive factor a; Belongs to the AAA ATPase family.
   
  
 0.460
S4RLV3_PETMA
Uncharacterized protein.
      
 0.458
S4RTW9_PETMA
Un-named sa1261.
      
 0.458
S4R7L8_PETMA
Calponin-homology (CH) domain-containing protein.
   
  
 0.457
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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