STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RFU2_PETMAPhosphoinositide-3-kinase, regulatory subunit 4. (647 aa)    
Predicted Functional Partners:
S4RAR0_PETMA
Phosphatidylinositol 3-kinase, catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
   
 0.991
S4RKV5_PETMA
Beclin 1, autophagy related.
    
 0.990
S4RIB3_PETMA
Serine/threonine kinase 35.
    
 0.989
ATG14
Autophagy related 14.
    
 0.989
S4RTJ7_PETMA
Protein kinase domain-containing protein.
 
     0.927
S4RXJ9_PETMA
WD_REPEATS_REGION domain-containing protein.
   
 
 0.889
S4RKN5_PETMA
ATG13 autophagy related 13 homolog (S. cerevisiae).
     
 0.869
S4RV34_PETMA
RB1-inducible coiled-coil 1.
     
 0.868
S4RGH2_PETMA
GABA(A) receptor-associated protein like 2.
     
 0.778
S4RHC0_PETMA
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.777
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.