STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RFY3_PETMACHAT domain-containing protein. (1128 aa)    
Predicted Functional Partners:
S4RR07_PETMA
Uncharacterized protein.
    
 0.935
S4REL5_PETMA
Uncharacterized protein.
  
 0.928
S4R4N4_PETMA
Heat shock protein 90 alpha family class A member 1.
  
 0.904
S4R5N6_PETMA
TSC complex subunit 1b.
  
 0.904
S4RDV2_PETMA
Heat shock protein 90 alpha family class A member 1.
  
 0.904
S4RSA9_PETMA
G protein signaling modulator 1b.
 
      0.899
S4R797_PETMA
Uncharacterized protein.
  
 0.850
S4RFE5_PETMA
Uncharacterized protein; Belongs to the heat shock protein 70 family.
  
 0.850
S4RIK7_PETMA
Heat shock protein 70 family, member 13.
  
 0.850
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
  
 0.850
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.