STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RG10_PETMALaminin N-terminal domain-containing protein. (204 aa)    
Predicted Functional Partners:
S4RI85_PETMA
Uncharacterized protein.
    
 0.963
S4S1M1_PETMA
Leucine rich repeat containing 4Ba.
    
 0.963
PIDD1
P53-induced death domain protein 1.
    
 0.953
S4R5M9_PETMA
Uncharacterized protein.
 
  
  0.935
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.932
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
    
 0.902
S4RTM4_PETMA
LRRCT domain-containing protein.
    
 0.902
S4RMT0_PETMA
Protein kinase domain-containing protein.
    
 0.879
S4RV31_PETMA
Uncharacterized protein.
    
 0.875
S4R7C5_PETMA
SLIT and NTRK-like family, member 2.
   
 0.848
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.