STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RG11_PETMAPhosphatidylinositol transfer protein, beta. (275 aa)    
Predicted Functional Partners:
S4RJK4_PETMA
PITPNM family member 3.
 
    
 0.901
S4RU41_PETMA
PITP-less RdgB-like protein.
 
    
 0.901
S4RUG7_PETMA
Phospholipase A2, group XV.
    
 0.716
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
  0.661
S4RR05_PETMA
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.647
S4R779_PETMA
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
     
 0.609
S4RTH1_PETMA
VAMP (vesicle-associated membrane protein)-associated protein B and C.
    
 
 0.568
S4R7D7_PETMA
FCP1 homology domain-containing protein.
    
 0.558
S4RF96_PETMA
FCP1 homology domain-containing protein.
    
 0.558
S4RGM6_PETMA
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.558
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.