STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RG15_PETMAGlyco_transf_64 domain-containing protein. (386 aa)    
Predicted Functional Partners:
S4RLS8_PETMA
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
 
  
0.917
S4RF18_PETMA
Glyco_transf_64 domain-containing protein.
    
0.912
S4RN04_PETMA
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
   
0.865
S4RTY0_PETMA
Glyco_transf_64 domain-containing protein.
  
0.807
S4RTA1_PETMA
Beta_elim_lyase domain-containing protein.
     
 0.801
SDS
Serine dehydratase.
     
 0.720
S4RK94_PETMA
Serine dehydratase.
     
 0.720
S4R5S7_PETMA
L-threonine dehydrogenase.
     
 0.660
S4R7J1_PETMA
Uncharacterized protein.
     
 0.654
S4RLT0_PETMA
Syndecan domain-containing protein.
    
 0.634
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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