STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RG30_PETMAPeptidase_M50 domain-containing protein. (268 aa)    
Predicted Functional Partners:
SAMM50
SAMM50 sorting and assembly machinery component.
  
  
 0.964
ATF6B
Activating transcription factor 6 beta.
     
 0.934
S4R749_PETMA
Alkyl transferase; Belongs to the UPP synthase family.
  
  
 0.925
S4RKS5_PETMA
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
  0.787
S4R8N0_PETMA
Sterol regulatory element binding transcription factor 2.
    
 0.784
S4RYM6_PETMA
BHLH domain-containing protein.
    
 0.784
S4RDS7_PETMA
BZIP domain-containing protein.
     
 0.742
CREB3L4
cAMP responsive element binding protein 3 like 4.
     
 0.742
S4RZN2_PETMA
cAMP responsive element binding protein 3-like 2.
     
 0.738
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
  
  
 0.646
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.