STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RG32_PETMAPoly [ADP-ribose] polymerase. (576 aa)    
Predicted Functional Partners:
S4RSA6_PETMA
Uncharacterized protein.
   
 
 0.740
S4R8K7_PETMA
RING-type domain-containing protein.
 
 
 
 0.688
S4RYB9_PETMA
RING-type domain-containing protein.
 
 
 
 0.688
S4RV94_PETMA
Si:dkey-3h3.3.
 
 
 
 0.668
S4RZQ0_PETMA
RING-type domain-containing protein.
   
 
 0.542
S4R8K5_PETMA
Uncharacterized protein.
  
 
0.524
S4R6T2_PETMA
Uncharacterized protein.
  
 
0.514
S4RBK5_PETMA
Histone deacetylase 11.
    
 0.492
S4RXA3_PETMA
Uncharacterized protein.
    
 
 0.422
S4RDB5_PETMA
WGR domain-containing protein.
   
 
 0.418
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.