STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RG75_PETMAEF-hand domain-containing protein. (211 aa)    
Predicted Functional Partners:
S4RSI9_PETMA
Gal_mutarotas_2 domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
   
 0.944
S4RFF4_PETMA
Uncharacterized protein.
   
 0.911
S4R535_PETMA
PRKCSH-like domain-containing protein.
 
      0.900
S4RHX2_PETMA
Uncharacterized protein.
     
 0.799
S4RHW3_PETMA
Uncharacterized protein.
     
 0.793
S4RHD8_PETMA
Alpha-amylase.
   
 
  0.751
S4R6M3_PETMA
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
   
 0.746
S4R730_PETMA
P-type domain-containing protein.
   
 0.746
S4RJX0_PETMA
NtCtMGAM_N domain-containing protein; Belongs to the glycosyl hydrolase 31 family.
   
 0.746
S4RUI2_PETMA
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
   
 0.746
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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