STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RGB0_PETMATransmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (375 aa)    
Predicted Functional Partners:
S4RDW8_PETMA
Protein tyrosine phosphatase, non-receptor type 23, b.
    
 0.995
S4RDD9_PETMA
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.993
S4RU07_PETMA
Charged multivesicular body protein 3.
   
 0.991
S4RHB7_PETMA
Charged multivesicular body protein 5a.
   
 0.989
S4RZ78_PETMA
Zgc:153240.
    
 0.988
S4R8B2_PETMA
PDZ domain-containing protein.
    
 0.951
S4RHY4_PETMA
Rhophilin, Rho GTPase binding protein 1.
    
 0.951
S4RRW6_PETMA
Programmed cell death 6 interacting protein.
    
 0.951
S4RN16_PETMA
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.946
IST1
IST1 factor associated with ESCRT-III.
    
 0.924
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.