STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RGC5_PETMAProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (263 aa)    
Predicted Functional Partners:
S4RTC7_PETMA
Uncharacterized protein.
 
 
 0.992
TRADD
Tnfrsf1a-associated via death domain.
    
 0.989
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
 0.989
S4RK02_PETMA
Uncharacterized protein.
    
 0.987
S4RLW1_PETMA
Ig-like domain-containing protein.
    
 0.987
S4RMK2_PETMA
Uncharacterized protein.
    
 0.961
S4RVX9_PETMA
WD repeat domain 90.
    
 0.961
S4REI3_PETMA
Baculoviral IAP repeat containing 6.
   
 0.956
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.931
S4RVS6_PETMA
TNF receptor-associated factor 7.
    
 0.926
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.