Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RGF4_PETMAPeroxisomal biogenesis factor 7. (324 aa)    
Predicted Functional Partners:
S4RMV6_PETMA
Peroxisomal biogenesis factor 5.
    
 0.999
S4S060_PETMA
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.997
S4RLX5_PETMA
Peroxisomal biogenesis factor 13.
   
 0.995
PEX14
Peroxisomal biogenesis factor 14.
    
 0.982
PEX14-2
Peroxisomal biogenesis factor 14.
    
 0.982
S4R6K2_PETMA
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
     
 0.981
S4RLW0_PETMA
Peroxisomal biogenesis factor 2.
   
 
 0.940
S4R6F6_PETMA
Peroxisomal biogenesis factor 6; Belongs to the AAA ATPase family.
     
 0.938
S4RA28_PETMA
Family with sequence similarity 185 member A.
    
 0.925
PDCL3
Phosducin like 3.
   
   0.899
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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