STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RGH4_PETMAUncharacterized protein. (628 aa)    
Predicted Functional Partners:
S4RHA5_PETMA
Laminin N-terminal domain-containing protein.
 
 
 0.984
S4RWQ1_PETMA
Uncharacterized protein.
 
 
 0.980
S4RUE3_PETMA
Uncharacterized protein.
 
 
 
 0.929
S4R4J9_PETMA
Uncharacterized protein.
 
    
0.912
S4RWQ2_PETMA
Laminin N-terminal domain-containing protein.
 
      0.900
S4RHD1_PETMA
Uncharacterized protein.
 
      0.877
S4RN02_PETMA
Uncharacterized protein.
 
 
 0.870
S4RER4_PETMA
Uncharacterized protein.
   
 0.852
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.844
S4R7J7_PETMA
Uncharacterized protein.
   
 0.798
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.