S4RGK2_PETMA protein (Petromyzon marinus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

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co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FCF1	NAT10	ENSPMAP00000000592	ENSPMAP00000004016	FCF1 rRNA-processing protein.	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	0.936
FCF1	S4R4K3_PETMA	ENSPMAP00000000592	ENSPMAP00000000132	FCF1 rRNA-processing protein.	Uncharacterized protein.	0.970
FCF1	S4R5N2_PETMA	ENSPMAP00000000592	ENSPMAP00000000512	FCF1 rRNA-processing protein.	WD repeat domain 46.	0.997
FCF1	S4RC43_PETMA	ENSPMAP00000000592	ENSPMAP00000002775	FCF1 rRNA-processing protein.	UTP4 small subunit processome component.	0.975
FCF1	S4RDW7_PETMA	ENSPMAP00000000592	ENSPMAP00000003399	FCF1 rRNA-processing protein.	Uncharacterized protein.	0.997
FCF1	S4REJ8_PETMA	ENSPMAP00000000592	ENSPMAP00000003630	FCF1 rRNA-processing protein.	NOP14 nucleolar protein homolog (yeast).	0.995
FCF1	S4RGK2_PETMA	ENSPMAP00000000592	ENSPMAP00000004334	FCF1 rRNA-processing protein.	DRIM domain-containing protein.	0.977
FCF1	S4RN64_PETMA	ENSPMAP00000000592	ENSPMAP00000006650	FCF1 rRNA-processing protein.	U3snoRNP10 domain-containing protein.	0.955
FCF1	S4RRJ1_PETMA	ENSPMAP00000000592	ENSPMAP00000007827	FCF1 rRNA-processing protein.	WD repeat domain 36.	0.961
FCF1	S4RXD7_PETMA	ENSPMAP00000000592	ENSPMAP00000009878	FCF1 rRNA-processing protein.	ZP domain-containing protein.	0.999
NAT10	FCF1	ENSPMAP00000004016	ENSPMAP00000000592	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	FCF1 rRNA-processing protein.	0.936
NAT10	S4R4K3_PETMA	ENSPMAP00000004016	ENSPMAP00000000132	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.990
NAT10	S4R5N2_PETMA	ENSPMAP00000004016	ENSPMAP00000000512	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	WD repeat domain 46.	0.995
NAT10	S4RC43_PETMA	ENSPMAP00000004016	ENSPMAP00000002775	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	UTP4 small subunit processome component.	0.995
NAT10	S4RDW7_PETMA	ENSPMAP00000004016	ENSPMAP00000003399	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	Uncharacterized protein.	0.995
NAT10	S4REJ8_PETMA	ENSPMAP00000004016	ENSPMAP00000003630	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	NOP14 nucleolar protein homolog (yeast).	0.996
NAT10	S4RGK2_PETMA	ENSPMAP00000004016	ENSPMAP00000004334	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	DRIM domain-containing protein.	0.982
NAT10	S4RN64_PETMA	ENSPMAP00000004016	ENSPMAP00000006650	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	U3snoRNP10 domain-containing protein.	0.990
NAT10	S4RRJ1_PETMA	ENSPMAP00000004016	ENSPMAP00000007827	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	WD repeat domain 36.	0.997
NAT10	S4RXD7_PETMA	ENSPMAP00000004016	ENSPMAP00000009878	RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.	ZP domain-containing protein.	0.974