Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RGL6_PETMAUncharacterized protein. (356 aa)    
Predicted Functional Partners:
S4RPS1_PETMA
Uncharacterized protein.
  
  
 
0.902
S4S1R2_PETMA
Uncharacterized protein.
  
  
 
0.901
S4R8Y6_PETMA
Galactosylceramidase a.
     
  0.900
S4RB43_PETMA
Beta-1,4 N-acetylgalactosaminyltransferase.
     
  0.900
NEU1
Neuraminidase 1.
     
  0.900
S4RCJ7_PETMA
BetaGal_dom4_5 domain-containing protein.
     
  0.900
S4RD07_PETMA
Alpha-galactosidase.
     
  0.900
S4RF87_PETMA
Glyco_trans_2-like domain-containing protein.
     
  0.900
S4RPN1_PETMA
Sulfatase domain-containing protein.
     
  0.900
S4RQA9_PETMA
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
  0.900
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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