STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RGL8_PETMATransmembrane protein 214. (470 aa)    
Predicted Functional Partners:
S4R837_PETMA
Plug_translocon domain-containing protein.
   
  
 0.514
S4RQC5_PETMA
Transmembrane protein 70.
      
 0.483
S4RFT4_PETMA
Kelch-like family member 31.
      
 0.478
S4RTT3_PETMA
tRNA methyltransferase 11 homolog.
      
 0.478
S4RQ12_PETMA
Exonuclease 3'-5' domain containing 2.
      
 0.477
S4RB50_PETMA
CCR4-NOT transcription complex, subunit 2.
      
 0.474
S4R872_PETMA
Arm_2 domain-containing protein.
      
 0.459
S4RJY3_PETMA
Uncharacterized protein.
      
 0.430
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.