Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RGN4_PETMACalcium channel, voltage-dependent, alpha 2/delta subunit 1a. (958 aa)    
Predicted Functional Partners:
S4RKP1_PETMA
Calcium channel, voltage-dependent, gamma subunit 1a.
    
 0.988
S4REI7_PETMA
Ion_trans domain-containing protein.
   
 0.976
S4RR27_PETMA
Voltage-dependent L-type calcium channel 1c.
   
 0.976
S4RTQ2_PETMA
Uncharacterized protein.
   
 0.976
S4RE36_PETMA
GuKc domain-containing protein.
   
 0.947
S4RW72_PETMA
SH3 domain-containing protein.
   
 0.947
S4RL35_PETMA
Calcium channel, voltage-dependent, alpha 2/delta subunit 4b.
   
 
0.925
S4RU19_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 
 0.918
S4R815_PETMA
VGCC_alpha2 domain-containing protein.
  
  
 
0.902
S4R9C4_PETMA
Uncharacterized protein.
   
 
  0.901
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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