STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RGN7_PETMAPhosphoinositide phospholipase C. (167 aa)    
Predicted Functional Partners:
PLCB4
Phosphoinositide phospholipase C.
 
   
 0.972
S4RW41_PETMA
Uncharacterized protein.
 
   
 0.961
S4RCX5_PETMA
Diacylglycerol kinase.
   
 0.810
S4RQH4_PETMA
Phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b.
   
 0.801
S4RDB9_PETMA
Phosphatidylinositol-4-phosphate 5-kinase-like 1.
    
 0.800
S4RF06_PETMA
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.797
S4RD94_PETMA
Synaptojanin 1.
   
 0.766
S4RUP9_PETMA
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.759
S4RGH0_PETMA
Inositol monophosphatase 1.
     
 0.758
S4S078_PETMA
IPPc domain-containing protein.
     
 0.756
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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