STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARVAParvin, alpha b. (294 aa)    
Predicted Functional Partners:
PXN-2
Paxillin.
   
 0.914
S4RNX4_PETMA
LIM and senescent cell antigen-like domains 2.
   
 0.894
S4RNX0_PETMA
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.830
S4RA16_PETMA
Uncharacterized protein.
    
 0.829
S4RLX2_PETMA
Alba domain-containing protein.
    
 0.823
S4RCD8_PETMA
Ribonuclease P 21 subunit.
    
  0.820
POP1
Uncharacterized protein.
    
  0.817
S4R7J7_PETMA
Uncharacterized protein.
   
 0.796
S4RSM3_PETMA
Integrin beta; Belongs to the integrin beta chain family.
   
 0.795
S4RX64_PETMA
Integrin beta; Belongs to the integrin beta chain family.
   
 0.795
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.