STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RGT4_PETMAUncharacterized protein. (308 aa)    
Predicted Functional Partners:
S4RNR0_PETMA
Plexin_cytopl domain-containing protein.
 
     0.935
S4R799_PETMA
Plexin_cytopl domain-containing protein.
 
      0.900
S4R7A1_PETMA
PSI domain-containing protein.
 
      0.900
S4R9P8_PETMA
Uncharacterized protein.
    
 0.897
S4RSR8_PETMA
Plexin_cytopl domain-containing protein.
 
      0.875
S4RJF2_PETMA
Sema domain-containing protein.
 
  
 0.849
RND2
Rho family GTPase 2.
    
 0.841
S4RB28_PETMA
Sema domain-containing protein.
    
 0.834
S4RKT8_PETMA
Protein kinase domain-containing protein.
    
 0.793
S4RM65_PETMA
Sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3bl; Belongs to the semaphorin family.
    
 0.762
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.