STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RGV9_PETMARegulator of chromosome condensation 1. (417 aa)    
Predicted Functional Partners:
S4RBB2_PETMA
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.932
S4RKG8_PETMA
Adhesion G protein-coupled receptor D1.
    
 0.932
S4RXD5_PETMA
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.845
S4R4J8_PETMA
RAN GTPase activating protein 1a.
   
 
 0.825
S4RHF3_PETMA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.820
RANBP2
RAN binding protein 2.
   
 0.820
S4RZU8_PETMA
Ubiquitin protein ligase E3A.
 
  
 0.747
S4RRQ0_PETMA
Karyopherin (importin) beta 1.
    
 
 0.720
S4RK14_PETMA
Uncharacterized protein.
   
 
 0.711
S4RYB0_PETMA
Importin subunit alpha; Belongs to the importin alpha family.
   
 
 0.711
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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