STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RH43_PETMATribbles pseudokinase 3. (244 aa)    
Predicted Functional Partners:
S4RTA2_PETMA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
 
 
0.853
S4RHF2_PETMA
Protein kinase AMP-activated non-catalytic subunit gamma 2.
   
 0.807
S4RHK2_PETMA
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.807
S4RLF3_PETMA
Protein kinase AMP-activated non-catalytic subunit gamma 2.
   
 0.807
S4R8W3_PETMA
Calcium binding protein 39-like.
    
 0.796
S4R7P3_PETMA
TSC complex subunit 2.
    
 0.786
S4RSP4_PETMA
Serine/threonine kinase 11.
    
 0.785
PPARD
Peroxisome proliferator activated receptor delta.
    
 0.775
S4RUQ2_PETMA
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.750
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 0.743
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.