Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RHK4_PETMAUncharacterized protein. (148 aa)    
Predicted Functional Partners:
S4RHL0_PETMA
Uncharacterized protein.
 
     0.938
S4RJ37_PETMA
Serine/threonine-protein phosphatase.
    
 0.871
PPP2R1A
Protein phosphatase 2, regulatory subunit A, beta b.
   
 0.871
S4RCA4_PETMA
Cell division cycle 20 homolog.
    
 0.771
S4RTA2_PETMA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.741
PPP2R5C
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
   
 0.714
PPP2R5C-2
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
   
 0.714
S4R4W9_PETMA
Cyclin B2; Belongs to the cyclin family.
    
 0.605
S4RD56_PETMA
Cell division cycle 27.
   
   0.599
S4RZC0_PETMA
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.580
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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