STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RHL0_PETMAUncharacterized protein. (162 aa)    
Predicted Functional Partners:
S4RGA7_PETMA
Protein phosphatase 2, regulatory subunit B', beta.
 
  
  0.963
S4RHK4_PETMA
Uncharacterized protein.
 
  
  0.959
PPP2R1A
Protein phosphatase 2, regulatory subunit A, beta b.
   
 0.909
S4RJ37_PETMA
Serine/threonine-protein phosphatase.
    
 0.904
PPP2R5C
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
  
 
0.821
PPP2R5C-2
Serine/threonine protein phosphatase 2A regulatory subunit; Belongs to the phosphatase 2A regulatory subunit.
  
 
0.821
S4RP34_PETMA
Protein phosphatase 2, regulatory subunit B, gamma b.
    
 0.817
S4RTA2_PETMA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.786
S4RG58_PETMA
Uncharacterized protein.
    
 0.770
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
    
 0.757
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.