Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RHS0_PETMAYTH domain-containing protein. (165 aa)    
Predicted Functional Partners:
S4RNS0_PETMA
Poly(A) binding protein, nuclear 1.
   
 
 0.730
S4RDU8_PETMA
Eukaryotic translation initiation factor 4, gamma 2a.
   
 
 0.700
S4RZJ8_PETMA
Mtr4 exosome RNA helicase.
    
 
 0.693
S4RU24_PETMA
Methyltransferase like 3; Belongs to the MT-A70-like family.
  
 
 
 0.690
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.686
S4RRX8_PETMA
WT1 associated protein.
   
  
 0.655
RBM27
RRM domain-containing protein.
    
 
 0.642
RPSA
Ribosomal protein SA.
    
   0.627
S4RVE0_PETMA
AlkB homolog 5, RNA demethylase.
      
 0.613
S4RYN4_PETMA
CCR4-NOT transcription complex, subunit 1.
   
 
 0.608
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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