Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RHW0_PETMACA domain-containing protein. (317 aa)    
Predicted Functional Partners:
S4RWY1_PETMA
Uncharacterized protein.
 
     0.941
S4RC20_PETMA
Amyloid beta (A4) precursor protein-binding, family A, member 1b.
    
 
 0.685
S4R6X9_PETMA
Uncharacterized protein.
    
 
 0.525
S4R7Z3_PETMA
Uncharacterized protein.
    
 
 0.525
S4RV60_PETMA
TPR_REGION domain-containing protein.
    
 
 0.525
S4RY27_PETMA
TPR_REGION domain-containing protein.
    
 
 0.525
S4R8M4_PETMA
Hairy-related 9.
      
 0.476
S4RSL4_PETMA
Nicotinamide-nucleotide adenylyltransferase.
      
 0.467
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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