Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RI09_PETMALRRNT domain-containing protein. (240 aa)    
Predicted Functional Partners:
S4RJW2_PETMA
Uncharacterized protein.
    
 
 0.740
S4RZS0_PETMA
Transforming growth factor beta regulator 1.
      
 0.731
S4S1K2_PETMA
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 
 0.684
S4RIK7_PETMA
Heat shock protein 70 family, member 13.
    
 
 0.680
S4RCH6_PETMA
Stomatin (EPB72)-like 1.
   
 
 0.679
S4RPQ7_PETMA
Uncharacterized protein.
      
 0.659
ARHGEF17
DH domain-containing protein.
      
 0.645
S4R9K6_PETMA
Ependymin related 1.
      
 0.622
S4RTQ6_PETMA
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.607
S4R6G9_PETMA
Transforming growth factor beta regulator 4.
    
 
 0.548
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.