STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RI14_PETMAPhosphodiesterase 6B, cGMP-specific, rod, beta. (371 aa)    
Predicted Functional Partners:
S4RPV7_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.945
S4RHI5_PETMA
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.934
S4RU37_PETMA
Guanylate cyclase domain-containing protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.924
S4R4B4_PETMA
Guanylate cyclase.
    
 0.912
A3RLS1_PETMA
Cone-like retinal photoreceptor cGMP-phosphodiesterase 6 gamma subunit.
   
 
 0.904
S4RVY4_PETMA
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 
 0.889
S4RHX2_PETMA
Uncharacterized protein.
     
 0.876
S4R6M4_PETMA
Adenylate cyclase 2a; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.870
S4RR95_PETMA
Uncharacterized protein; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.869
GNB3-2
WD_REPEATS_REGION domain-containing protein.
     
 0.866
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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