Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RI70_PETMAUncharacterized protein. (783 aa)    
Predicted Functional Partners:
S4R9E4_PETMA
Embryonic ectoderm development.
   
 0.999
S4RRX9_PETMA
Retinoblastoma binding protein 4, like.
    
 0.999
S4RZ66_PETMA
SUZ12 polycomb repressive complex 2 subunit a.
   
 0.999
S4R9H0_PETMA
Jumonji, AT rich interactive domain 2a.
   
 0.991
S4R5U8_PETMA
PHD finger protein 1.
   
 0.987
S4RN73_PETMA
YY1 transcription factor b.
   
 0.987
S4RAY1_PETMA
Uncharacterized protein.
   
 0.967
DNMT1
DNA methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 0.967
S4RQ11_PETMA
Bmi1 polycomb ring finger oncogene 1b.
    
 0.958
DNMT3A
DNA methyltransferase 3 alpha; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 0.956
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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