STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RIC6_PETMAUncharacterized protein. (846 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
    
 0.711
S4RVS6_PETMA
TNF receptor-associated factor 7.
    
 0.620
S4RDH8_PETMA
Enoyl-CoA delta isomerase 2.
    
  0.611
S4RRA2_PETMA
Enoyl-CoA delta isomerase 2.
    
  0.611
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 0.577
S4RMF7_PETMA
UBX domain protein 7.
    
 0.568
S4RR10_PETMA
Zinc finger, AN1-type domain 4.
    
 0.563
RANBP2
RAN binding protein 2.
  
 
 0.563
S4RWD7_PETMA
Uncharacterized protein.
    
 0.538
S4REI3_PETMA
Baculoviral IAP repeat containing 6.
    
 0.535
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.