STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIAO1Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family. (340 aa)    
Predicted Functional Partners:
S4RXD4_PETMA
Cytosolic iron-sulfur assembly component 2B.
    
 0.998
S4RJD7_PETMA
MMS19_N domain-containing protein.
    
 0.994
CIAO2A
Cytosolic iron-sulfur assembly component 2A.
    
 0.984
S4RQB2_PETMA
Excision repair cross-complementation group 2.
    
 0.850
S4REN1_PETMA
Nucleotide binding protein 1 (MinD homolog, E. coli).
 
 
 0.739
S4RZ40_PETMA
Nucleotide binding protein-like.
 
  
 0.703
S4RAM8_PETMA
DNA polymerase.
    
 0.684
GNB3-2
WD_REPEATS_REGION domain-containing protein.
 
  
  
0.621
RTEL1-TNFRSF6B
Helicase ATP-binding domain-containing protein.
    
 0.618
S4RVQ1_PETMA
HELICc2 domain-containing protein.
    
 0.618
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.