STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RIM6_PETMAATP-binding cassette, sub-family F (GCN20), member 3. (98 aa)    
Predicted Functional Partners:
S4RPK4_PETMA
Uncharacterized protein.
 
   
0.910
S4RWC4_PETMA
Uncharacterized protein.
 
      0.900
S4RAC1_PETMA
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.743
S4S0I0_PETMA
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.732
S4RW97_PETMA
Mitochondrial ribosomal protein L21.
  
   0.731
S4R4U3_PETMA
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.729
S4RFI6_PETMA
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.729
S4RAQ9_PETMA
Ribosomal_L18_c domain-containing protein.
  
 
 0.722
S4RTQ6_PETMA
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
   0.720
S4RR77_PETMA
S1 motif domain-containing protein.
   
 0.719
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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