STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RIN4_PETMASerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (134 aa)    
Predicted Functional Partners:
S4RW84_PETMA
WD repeat domain 82.
    
 0.946
S4R719_PETMA
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.942
S4R4E2_PETMA
SER_THR_PHOSPHATASE domain-containing protein.
 
     0.940
S4RZ36_PETMA
Protein phosphatase 1 regulatory subunit.
   
 0.932
S4RE76_PETMA
Cleavage and polyadenylation specific factor 1.
    
 0.915
S4RJF8_PETMA
Uncharacterized protein.
   
 0.913
S4RNW6_PETMA
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.906
WDR33
WD_REPEATS_REGION domain-containing protein.
    
 0.903
S4RR77_PETMA
S1 motif domain-containing protein.
   
 0.895
S4R6D5_PETMA
Protein phosphatase 1, regulatory (inhibitor) subunit 7.
 
 
 0.876
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.