STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RIQ5_PETMASUEL-type lectin domain-containing protein. (345 aa)    
Predicted Functional Partners:
S4R7W7_PETMA
Uncharacterized protein.
    
 
 0.778
S4RDU5_PETMA
Uncharacterized protein.
    
 
 0.556
S4RK80_PETMA
Uncharacterized protein.
    
 
 0.556
S4RC46_PETMA
Protein O-fucosyltransferase 2.
      
 0.476
S4RE86_PETMA
FERM domain containing 6.
    
   0.465
S4RMA7_PETMA
FERM domain containing 6.
    
   0.465
S4RPP3_PETMA
Pyridoxal (pyridoxine, vitamin B6) kinase a.
      
 0.457
S4RM01_PETMA
Uncharacterized protein.
    
 
 0.456
S4RPG5_PETMA
Uncharacterized protein.
    
 
 0.456
S4RTL3_PETMA
Uncharacterized protein.
    
 
 0.456
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.