STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RIU4_PETMAGlycerophosphodiester phosphodiesterase 1. (246 aa)    
Predicted Functional Partners:
S4RY68_PETMA
Cardiolipin synthase 1.
   
 0.888
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
   
 
 0.858
S4R779_PETMA
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 0.808
S4RE72_PETMA
Uncharacterized protein.
    
 0.802
MBOAT2
Membrane bound O-acyltransferase domain containing 2; Belongs to the membrane-bound acyltransferase family.
   
 
 0.795
S4RMA0_PETMA
Uncharacterized protein.
   
 
 0.795
S4RK19_PETMA
Uncharacterized protein; Belongs to the alkaline phosphatase family.
  
 
 0.782
S4RQR1_PETMA
Glycerophosphocholine phosphodiesterase 1.
     
 0.758
S4RCE8_PETMA
Propionyl-CoA carboxylase subunit alpha.
    
  0.747
S4RAR7_PETMA
L-2-hydroxyglutarate dehydrogenase.
    
 0.742
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.