Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RIW3_PETMASi:rp71-17i16.4. (167 aa)    
Predicted Functional Partners:
S4RL37_PETMA
Troponin I type 2a (skeletal, fast), tandem duplicate 4.
   
 0.992
S4R5P2_PETMA
Uncharacterized protein.
   
 0.968
S4RR41_PETMA
Uncharacterized protein.
  
 
 
0.962
S4RS77_PETMA
Myosin light chain 1.
  
  0.949
S4RJ15_PETMA
Uncharacterized protein.
   
 0.942
S4RQ63_PETMA
Troponin T type 3a (skeletal, fast).
   
 0.942
TNNT2
Troponin T type 2b (cardiac).
   
 0.942
S4RHX2_PETMA
Uncharacterized protein.
    
 
 0.891
S4RBY6_PETMA
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.852
S4RF23_PETMA
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.852
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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