Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBX1-2Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
S4RLY1_PETMA
CAF1-p150_C2 domain-containing protein.
    
 
 0.613
SUV39H2
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 0.543
S4RW98_PETMA
Uncharacterized protein.
    
 0.543
S4RWX1_PETMA
SET domain and mariner transposase fusion gene.
    
 0.543
S4RR64_PETMA
Uncharacterized protein.
    
 
 0.517
S4R967_PETMA
SET domain bifurcated histone lysine methyltransferase 1b.
    
 0.506
S4R4L4_PETMA
Mbt domain containing 1.
    
 0.496
S4RBD1_PETMA
L3MBTL histone methyl-lysine binding protein 1b.
    
 0.496
S4RLX0_PETMA
L3MBTL histone methyl-lysine binding protein 1b.
    
 0.496
SFMBT1
Scm like with four mbt domains 1.
    
 0.496
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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