Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4RJ81_PETMAGB1/RHD3-type G domain-containing protein. (104 aa)    
Predicted Functional Partners:
S4RCB6_PETMA
GB1/RHD3-type G domain-containing protein.
 
     0.530
S4RMW1_PETMA
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide b; Belongs to the 14-3-3 family.
    
  0.528
S4R956_PETMA
Uncharacterized protein.
     
 0.512
S4RWR2_PETMA
Protein geranylgeranyltransferase type I, beta subunit.
     
  0.486
S4RT88_PETMA
Uncharacterized protein; Belongs to the peptidase C14A family.
   
 
 0.460
S4REF2_PETMA
GBP_C domain-containing protein.
  
     0.436
CHURC1-FNTB
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
     
  0.431
S4RI02_PETMA
Farnesyltransferase, CAAX box, alpha.
     
  0.410
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (16%) [HD]