STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RJD0_PETMARHD domain-containing protein. (223 aa)    
Predicted Functional Partners:
S4REA4_PETMA
ANK_REP_REGION domain-containing protein.
 
 
 0.963
S4RPP1_PETMA
Uncharacterized protein.
  
0.925
S4RXD5_PETMA
Importin subunit alpha; Belongs to the importin alpha family.
    
  0.869
S4RTQ6_PETMA
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.834
S4R9C4_PETMA
Uncharacterized protein.
   
 0.830
S4RFF2_PETMA
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.825
S4RJD3_PETMA
E1A binding protein p300 a.
    
 0.824
S4RJ37_PETMA
Serine/threonine-protein phosphatase.
    
 0.815
S4R4I2_PETMA
ANK_REP_REGION domain-containing protein.
   
 0.807
S4RYL0_PETMA
N-lysine methyltransferase SETD6; Protein-lysine N-methyltransferase. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily.
    
 0.802
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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