Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A3Solute carrier family 39 member 3. (334 aa)    
Predicted Functional Partners:
SAMM50
SAMM50 sorting and assembly machinery component.
    
 
 0.898
TOMM40L
Translocase of outer mitochondrial membrane 40 homolog (yeast).
   
 
 0.890
S4RMW0_PETMA
Metaxin.
    
 
 0.867
SLC39A12
Solute carrier family 39 member 12.
   
 0.865
S4RNG5_PETMA
Uncharacterized protein.
   
 0.759
SLC39A13
Solute carrier family 39 member 13.
   
 0.735
S4R591_PETMA
Solute carrier family 39 member 10.
   
 0.719
S4R5A5_PETMA
Solute carrier family 39 member 14.
   
 0.717
S4RRE6_PETMA
Prohibitin.
    
 
 0.710
S4RVE3_PETMA
Solute carrier family 30 member 1a.
   
 
 0.696
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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