STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RJH3_PETMAUncharacterized protein; Belongs to the CTL (choline transporter-like) family. (173 aa)    
Predicted Functional Partners:
S4RU20_PETMA
Organic cation transporter 2.
     
 0.896
S4RFZ7_PETMA
Solute carrier family 44 member 1a; Belongs to the CTL (choline transporter-like) family.
  
 
0.847
S4REX4_PETMA
Uncharacterized protein.
 
  
 0.840
S4RFT6_PETMA
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.812
S4RIL9_PETMA
Solute carrier family 5 member 7a; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.812
S4RAZ0_PETMA
Uncharacterized protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.760
SLC22A8
Solute carrier family 22 member 8.
     
 0.739
S4RPF5_PETMA
Si:dkey-166k12.1.
     
 0.739
SLC22A7
Solute carrier family 22 member 7.
     
 0.739
TTC6
Tetratricopeptide repeat domain 6.
   
    0.645
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.