S4RJJ5_PETMA protein (Petromyzon marinus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

S4RJJ5_PETMA

Uncharacterized protein. (694 aa)

Predicted Functional Partners:

S4RND0_PETMA

0.798

S4RL43_PETMA

0.641

TGFB2

0.561

S4RMZ1_PETMA

0.561

S4RPX1_PETMA

0.561

S4S1S9_PETMA

0.561

TIMP1

0.545

CALU

0.532

S4R4E3_PETMA

0.519

S4R848_PETMA

0.515

Your Current Organism:

Petromyzon marinus

NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALU	S4RJJ5_PETMA	ENSPMAP00000003368	ENSPMAP00000005378	Uncharacterized protein.	Uncharacterized protein.	0.532
CALU	S4RL43_PETMA	ENSPMAP00000003368	ENSPMAP00000005929	Uncharacterized protein.	Uncharacterized protein.	0.786
CALU	S4RND0_PETMA	ENSPMAP00000003368	ENSPMAP00000006716	Uncharacterized protein.	Uncharacterized protein.	0.532
CALU	S4RPX1_PETMA	ENSPMAP00000003368	ENSPMAP00000007257	Uncharacterized protein.	Collagen, type VI, alpha 1.	0.723
CALU	TIMP1	ENSPMAP00000003368	ENSPMAP00000005637	Uncharacterized protein.	TIMP metallopeptidase inhibitor 1.	0.712
S4R4E3_PETMA	S4RJJ5_PETMA	ENSPMAP00000000072	ENSPMAP00000005378	Uncharacterized protein.	Uncharacterized protein.	0.519
S4R848_PETMA	S4RJJ5_PETMA	ENSPMAP00000001379	ENSPMAP00000005378	Uncharacterized protein.	Uncharacterized protein.	0.515
S4R848_PETMA	S4RMZ1_PETMA	ENSPMAP00000001379	ENSPMAP00000006577	Uncharacterized protein.	TGF_BETA_2 domain-containing protein.	0.459
S4R848_PETMA	S4RND0_PETMA	ENSPMAP00000001379	ENSPMAP00000006716	Uncharacterized protein.	Uncharacterized protein.	0.515
S4R848_PETMA	S4S1S9_PETMA	ENSPMAP00000001379	ENSPMAP00000011421	Uncharacterized protein.	TGFb_propeptide domain-containing protein.	0.459
S4R848_PETMA	TGFB2	ENSPMAP00000001379	ENSPMAP00000002185	Uncharacterized protein.	Transforming growth factor, beta 2.	0.459
S4RJJ5_PETMA	CALU	ENSPMAP00000005378	ENSPMAP00000003368	Uncharacterized protein.	Uncharacterized protein.	0.532
S4RJJ5_PETMA	S4R4E3_PETMA	ENSPMAP00000005378	ENSPMAP00000000072	Uncharacterized protein.	Uncharacterized protein.	0.519
S4RJJ5_PETMA	S4R848_PETMA	ENSPMAP00000005378	ENSPMAP00000001379	Uncharacterized protein.	Uncharacterized protein.	0.515
S4RJJ5_PETMA	S4RL43_PETMA	ENSPMAP00000005378	ENSPMAP00000005929	Uncharacterized protein.	Uncharacterized protein.	0.641
S4RJJ5_PETMA	S4RMZ1_PETMA	ENSPMAP00000005378	ENSPMAP00000006577	Uncharacterized protein.	TGF_BETA_2 domain-containing protein.	0.561
S4RJJ5_PETMA	S4RND0_PETMA	ENSPMAP00000005378	ENSPMAP00000006716	Uncharacterized protein.	Uncharacterized protein.	0.798
S4RJJ5_PETMA	S4RPX1_PETMA	ENSPMAP00000005378	ENSPMAP00000007257	Uncharacterized protein.	Collagen, type VI, alpha 1.	0.561
S4RJJ5_PETMA	S4S1S9_PETMA	ENSPMAP00000005378	ENSPMAP00000011421	Uncharacterized protein.	TGFb_propeptide domain-containing protein.	0.561
S4RJJ5_PETMA	TGFB2	ENSPMAP00000005378	ENSPMAP00000002185	Uncharacterized protein.	Transforming growth factor, beta 2.	0.561