STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RJL2_PETMARUN domain-containing protein. (221 aa)    
Predicted Functional Partners:
S4R9P3_PETMA
FYVE-type domain-containing protein.
 
  
   0.934
S4RZF2_PETMA
RAB4B, member RAS oncogene family.
    
  0.699
S4RKA1_PETMA
Pleckstrin homology domain containing, family M (with RUN domain) member 1.
     
 0.606
DNA2
DNA replication helicase/nuclease 2.
 
      0.586
S4RHQ9_PETMA
Vacuolar protein sorting 45 homolog; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.585
TPI1
Triosephosphate isomerase.
 
      0.521
S4R8W9_PETMA
AAA_12 domain-containing protein.
 
      0.518
S4RNS8_PETMA
Zinc finger, C2HC-type containing 1A.
      
 0.483
S4RR09_PETMA
Uncharacterized protein.
    
   0.483
S4RAR0_PETMA
Phosphatidylinositol 3-kinase, catalytic subunit type 3; Belongs to the PI3/PI4-kinase family.
    
 
 0.454
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.