STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RJM1_PETMAPDZ domain-containing protein. (830 aa)    
Predicted Functional Partners:
S4RJZ9_PETMA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.649
S4R4E2_PETMA
SER_THR_PHOSPHATASE domain-containing protein.
    
 
 0.508
S4RT78_PETMA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.508
S4RIN4_PETMA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 
 0.495
PPP1CB
Serine/threonine-protein phosphatase.
    
 
 0.409
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.