Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4RJU4_PETMATestis expressed 9. (398 aa)    
Predicted Functional Partners:
CCDC112
Coiled-coil domain containing 112.
    
 
 0.938
S4RPB8_PETMA
Uncharacterized protein.
      
 0.677
S4R4X6_PETMA
Centrosomal protein 104.
      
 0.661
S4RDJ8_PETMA
Coiled-coil domain containing 6b.
      
 0.650
S4RRX1_PETMA
ELMO/CED-12 domain containing 2.
      
 0.643
S4R9R0_PETMA
GST_C_6 domain-containing protein.
      
 0.614
S4RHI4_PETMA
Cdk5 and Abl enzyme substrate 1.
      
 0.611
CEP128
Centrosomal protein 128.
      
 0.610
S4RE97_PETMA
Uncharacterized protein.
      
 0.609
TLCD3A
TLC domain containing 3B.
      
 0.605
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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