Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4RJV1_PETMAFamily with sequence similarity 117 member Bb. (365 aa)    
Predicted Functional Partners:
S4RTN3_PETMA
Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a.
    
 
 0.821
S4S1G2_PETMA
Uncharacterized protein.
    
 
 0.809
DCAF7
Ddb1 and cul4 associated factor 7.
    
 
 0.782
S4RKV0_PETMA
Solute carrier family 35 member B1.
 
      0.683
S4R619_PETMA
DUF4708 domain-containing protein.
      
 0.586
S4RUS1_PETMA
Uncharacterized protein.
      
 0.560
MED25
Mediator complex subunit 25.
      
 0.546
S4RR75_PETMA
Kelch-like family member 18.
    
   0.529
S4RPD8_PETMA
Dual specificity phosphatase 19b.
      
 0.464
S4RXV4_PETMA
Uncharacterized protein.
    
 
 0.462
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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