STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RJY0_PETMABtz domain-containing protein. (128 aa)    
Predicted Functional Partners:
S4RC87_PETMA
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.998
S4R808_PETMA
Uncharacterized protein.
    
 0.986
S4RHF3_PETMA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.985
RANBP2
RAN binding protein 2.
    
  0.985
S4REH6_PETMA
Aquarius intron-binding spliceosomal factor.
    
 
 0.933
S4RUQ6_PETMA
MIF4G domain-containing protein.
    
 0.895
S4RN48_PETMA
WD_REPEATS_REGION domain-containing protein.
    
  0.832
S4RDQ2_PETMA
Pinin, desmosome associated protein.
    
 0.802
AQR
Aquarius intron-binding spliceosomal factor.
    
 
 0.790
S4RXJ6_PETMA
DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa.
   
 0.788
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.