STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RK53_PETMALLP homolog, long-term synaptic facilitation factor. (131 aa)    
Predicted Functional Partners:
S4R7R4_PETMA
Uncharacterized protein.
   
    0.912
S4RQ72_PETMA
Ribosomal_L7Ae domain-containing protein.
    
   0.833
S4S075_PETMA
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.770
S4RYY5_PETMA
Ribosomal protein L11.
   
   0.690
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.678
S4RAQ9_PETMA
Ribosomal_L18_c domain-containing protein.
    
   0.676
S4R718_PETMA
Ribosomal protein L4.
    
   0.668
S4RGL0_PETMA
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
    
   0.668
S4RR28_PETMA
Ribosomal protein L31.
    
   0.668
S4R731_PETMA
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.665
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.