STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RK71_PETMACholinergic receptor, nicotinic, delta (muscle); Belongs to the ligand-gated ion channel (TC 1.A.9) family. (332 aa)    
Predicted Functional Partners:
S4RSK2_PETMA
Neur_chan_LBD domain-containing protein.
 
     0.922
S4RUF2_PETMA
Cholinergic receptor, nicotinic, alpha 2a (neuronal).
  
 
0.855
S4RB40_PETMA
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
0.777
S4R4M0_PETMA
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
0.750
S4RTH2_PETMA
Si:ch73-380n15.2.
   
0.750
S4REV7_PETMA
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
 
0.735
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.