STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLHL12Kelch like family member 12. (555 aa)    
Predicted Functional Partners:
S4RHX4_PETMA
Cullin 1b; Belongs to the cullin family.
    
 0.761
S4R834_PETMA
DEP domain-containing protein.
    
 0.746
S4RR98_PETMA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.745
S4RIV5_PETMA
N-acetylneuraminic acid phosphatase.
    
 
 0.701
S4RYX0_PETMA
Uncharacterized protein.
   
   0.682
S4RTC7_PETMA
Uncharacterized protein.
    
 0.681
S4RU02_PETMA
Mitotic arrest deficient 2 like 2.
    
   0.678
S4RMF7_PETMA
UBX domain protein 7.
    
  0.651
S4RT63_PETMA
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.622
S4RCU3_PETMA
Bardet-Biedl syndrome 7.
    
 0.619
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.